Transcript: LINC01060:13

Basic information

LNCipedia transcript ID: LINC01060:13 
LNCipedia gene ID: LINC01060
Location (hg19): chr4:189398906-189523025
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 352 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT099749
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -356.6764 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01060:13 no no no no

Available literature

  1. Shi (2018), Loss of Linc01060 induces pancreatic cancer progression through vinculin-mediated focal adhesion turnover., Cancer Lett.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIML1-3:14
4.0 LINC01060:13
4.1 LINC01060:13
5.0 LINC01060:13
5.1 LINC01060:13
5.2 LINC01060:13