Transcript: LINC01060:29

Basic information

LNCipedia transcript ID: LINC01060:29 
LNCipedia gene ID: LINC01060
Location (hg19): chr4:189376732-189523062
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 483 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249378.1|ENST00000510005.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -248.8106 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01060:29 no no no no

Available literature

  1. Shi (2018), Loss of Linc01060 induces pancreatic cancer progression through vinculin-mediated focal adhesion turnover., Cancer Lett.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01060:29
5.0 LINC01060:29
5.1 LINC01060:29
5.2 LINC01060:29