Transcript: LINC01070:4

Basic information

LNCipedia transcript ID: LINC01070:4 
LNCipedia gene ID: LINC01070
Location (hg19): chr13:112851664-112855312
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2827 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute
Alternative transcript names: ENST00000507553; TCONS_00021602
Alternative gene names: ENSG00000250160; XLOC_010505; linc-C13orf28-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.2007 non-coding 
CPAT coding probability 28.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01070:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SOX1-2:3
3.1 lnc-SOX1-3:4
4.0 LINC01070:4
4.1 LINC01070:4
5.0 LINC01070:4
5.1 LINC01070:4
5.2 LINC01070:4