Transcript: LINC01088:38

Basic information

LNCipedia transcript ID: LINC01088:38 
LNCipedia gene ID: LINC01088
Location (hg19): chr4:80180024-80229808
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 590 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249307.1|ENST00000511241.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.4041 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01088:38 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01088:38
5.0 LINC01088:38
5.1 LINC01088:38
5.2 LINC01088:38