Transcript: LINC01093:10

Basic information

LNCipedia transcript ID: LINC01093:10 
LNCipedia gene ID: LINC01093
Location (hg19): chr4:185814142-185820604
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1640 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009197; NONHSAT099576
Alternative gene names: XLOC_004209; linc-ACSL1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.0875 non-coding 
CPAT coding probability 5.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01093:10 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACSL1-2:9
3.1 lnc-ACSL1-2:9
4.0 LINC01093:10
4.1 LINC01093:10
5.0 LINC01093:10
5.1 LINC01093:10
5.2 LINC01093:10