Transcript: LINC01093:20

Basic information

LNCipedia transcript ID: LINC01093:20 
LNCipedia gene ID: LINC01093
Location (hg19): chr4:185815055-185820615
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 628 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249173.1|ENST00000507183.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -116.1204 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01093:20 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01093:20
5.0 LINC01093:20
5.1 LINC01093:20
5.2 LINC01093:20