Transcript: LINC01102:7

Basic information

LNCipedia transcript ID: LINC01102:7 
HGNC Gene Symbol: LINC01102    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1102
Ensembl Gene ID: ENSG00000235597
Ensembl Transcript ID: ENST00000429464
Location (hg19): chr2:105050820-105124289
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2128 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000429464; ENST00000429464.1; AC013402.2-004; OTTHUMT00000329245.1; NONHSAT072915
Alternative gene names: ENSG00000235597; AC013402.2; ENSG00000235597.1; OTTHUMG00000153050.1; LINC01102;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.2535 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01102:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POU3F3-4:5
3.1 lnc-POU3F3-4:5
4.0 LINC01102:7
4.1 LINC01102:7
5.0 LINC01102:7
5.1 LINC01102:7
5.2 LINC01102:7