Transcript: LINC01103:2

Basic information

LNCipedia transcript ID: LINC01103:2 
HGNC Gene Symbol: LINC01103    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1103
Ensembl Gene ID: ENSG00000234781
Ensembl Transcript ID: ENST00000430551
Location (hg19): chr2:105104916-105126967
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1457 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430551; ENST00000430551.2; AC068535.4-001; OTTHUMT00000329246.2
Alternative gene names: ENSG00000234781; AC068535.4; ENSG00000234781.2; OTTHUMG00000153051.2; LINC01103;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1915 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01103:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TGFBRAP1-8:2
3.1 lnc-TGFBRAP1-9:2
4.0 LINC01103:2
4.1 LINC01103:2
5.0 LINC01103:2
5.1 LINC01103:2
5.2 LINC01103:2