Transcript: LINC01106:10

Basic information

LNCipedia transcript ID: LINC01106:10 
HGNC Gene Symbol: LINC01106    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1106
Ensembl Gene ID: ENSG00000175772
Ensembl Transcript ID: ENST00000448359
Location (hg19): chr2:111132733-111140810
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2443 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000448359; ENST00000448359.1; AC112229.7-002; OTTHUMT00000338355.2
Alternative gene names: ENSG00000175772; AC112229.7; ENSG00000175772.10; OTTHUMG00000155034.3; LINC01106; FLJ38359


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.4554 non-coding 
CPAT coding probability 11.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01106:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC108938.5.1-1:2
3.1 lnc-AC108938.5.1-2:2
4.0 LINC01106:10
4.1 LINC01106:10
5.0 LINC01106:10
5.1 LINC01106:10
5.2 LINC01106:10