Transcript: LINC01120:8

Basic information

LNCipedia transcript ID: LINC01120:8 
LNCipedia gene ID: LINC01120
Location (hg19): chr2:132160478-132167680
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2828 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004888; NONHSAT074456
Alternative gene names: XLOC_001674; linc-TUBA3D-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.9687 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01120:8 no no no no

Available literature

  1. Durinck (2014), The Notch driven long non-coding RNA repertoire in T-cell acute lymphoblastic leukemia., Haematologica
  2. Idogawa (2014), Identification and analysis of large intergenic non-coding RNAs regulated by p53 family members through a genome-wide analysis of p53-binding sites., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLEKHB2-1:5
3.1 lnc-PLEKHB2-1:5
4.0 LINC01120:8
4.1 LINC01120:8
5.0 LINC01120:8
5.1 LINC01120:8
5.2 LINC01120:8