Transcript: LINC01124:20

Basic information

LNCipedia transcript ID: LINC01124:20 
LNCipedia gene ID: LINC01124
Location (hg19): chr2:171475138-171500454
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1177 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000423519.2
Alternative gene names: ENSG00000213981.4; AC007277.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.4335 non-coding 
CPAT coding probability 9.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01124:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-2:4
4.0 lnc-AC007405.2.1-2:4
4.1 LINC01124:20
5.0 LINC01124:20
5.1 LINC01124:20
5.2 LINC01124:20