Transcript: LINC01132:1

Basic information

LNCipedia transcript ID: LINC01132:1 
HGNC Gene Symbol: LINC01132    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1132
Ensembl Gene ID: ENSG00000227630
Ensembl Transcript ID: ENST00000437601
RefSeq ID: NR_038856
Location (hg19): chr1:234859789-234867390
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3793 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT010311; NR_038856; ENST00000437601.2; NR_038856.1
Alternative gene names: ENSG00000227630.2; LINC01132; ; ENSG00000227630.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.4215 non-coding 
CPAT coding probability 6.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01132:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf31-8:2
4.0 LINC01132:1
4.1 LINC01132:1
5.0 LINC01132:1
5.1 LINC01132:1
5.2 LINC01132:1