Transcript: LINC01132:2

Basic information

LNCipedia transcript ID: LINC01132:2 
LNCipedia gene ID: LINC01132
Location (hg19): chr1:234861148-234867390
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3574 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000437601; TCONS_00000071; ENST00000437601.1; RP4-781K5.8-001; OTTHUMT00000092806.1; NONHSAT139939
Alternative gene names: ENSG00000227630; XLOC_000626; linc-GGPS1-2; RP4-781K5.8; ENSG00000227630.1; OTTHUMG00000038017.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.4215 non-coding 
CPAT coding probability 6.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01132:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf31-5:1
3.1 lnc-C1orf31-8:1
4.0 LINC01132:2
4.1 LINC01132:2
5.0 LINC01132:2
5.1 LINC01132:2
5.2 LINC01132:2