Transcript: LINC01134:5

Basic information

LNCipedia transcript ID: LINC01134:5 
LNCipedia gene ID: LINC01134
RefSeq ID: NR_024455
Location (hg19): chr1:3816968-3832011
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1952 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT000557; NR_024455; NR_024455.1
Alternative gene names: ; LINC01134


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.254 non-coding 
CPAT coding probability 28.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01134:5 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DFFB-1:6
4.0 LINC01134:5
4.1 LINC01134:5
5.0 LINC01134:5
5.1 LINC01134:5
5.2 LINC01134:5