Transcript: LINC01137:2

Basic information

LNCipedia transcript ID: LINC01137:2 
LNCipedia gene ID: LINC01137
RefSeq ID: NR_038842
Location (hg19): chr1:37920480-37940044
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1427 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT002438; NR_038842; NR_038842.1
Alternative gene names: LOC728431; LINC01137


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.8916 non-coding 
CPAT coding probability 3.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01137:2 no no no no

Available literature

  1. Sakurai (2015), The lncRNA DRAIC/PCAT29 Locus Constitutes a Tumor-Suppressive Nexus., Mol. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEAF6-1:5
4.0 LINC01137:2
4.1 LINC01137:2
5.0 LINC01137:2
5.1 LINC01137:2
5.2 LINC01137:2