Transcript: LINC01137:6

Basic information

LNCipedia transcript ID: LINC01137:6 
LNCipedia gene ID: LINC01137
Location (hg19): chr1:37920492-37922049
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1104 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00002336
Alternative gene names: XLOC_000787; linc-GRIK3-2; LOC728431


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -242.3241 non-coding 
CPAT coding probability 3.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01137:6 no no no no

Available literature

  1. Sakurai (2015), The lncRNA DRAIC/PCAT29 Locus Constitutes a Tumor-Suppressive Nexus., Mol. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MEAF6-1:3
3.1 lnc-MEAF6-1:3
4.0 LINC01137:6
4.1 LINC01137:6
5.0 LINC01137:6
5.1 LINC01137:6
5.2 LINC01137:6