Transcript: LINC01143:2

Basic information

LNCipedia transcript ID: LINC01143:2 
HGNC Gene Symbol: LINC01143    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1143
Ensembl Gene ID: ENSG00000237751
Ensembl Transcript ID: ENST00000449073
Location (hg19): chr2:71115001-71117089
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 625 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000449073; ENST00000449073.2; AC007040.5-001; OTTHUMT00000330276.2; NONHSAT071515
Alternative gene names: ENSG00000237751; AC007040.5; ENSG00000237751.2; OTTHUMG00000153230.2; LINC01143;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01143:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VAX2-1:2
3.1 lnc-VAX2-1:1
4.0 LINC01143:2
4.1 LINC01143:2
5.0 LINC01143:2
5.1 LINC01143:2
5.2 LINC01143:2