Transcript: LINC01144:13

Basic information

LNCipedia transcript ID: LINC01144:13 
HGNC Gene Symbol: LINC01144    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1144
Ensembl Gene ID: ENSG00000281912
Ensembl Transcript ID: ENST00000626198
RefSeq ID: NR_024270
Location (hg19): chr1:45769582-45771291
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1710 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT002925; NR_024270; ENST00000626198.1; NR_024270.1
Alternative gene names: ENSG00000281912.1; LINC01144


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.8629 non-coding 
CPAT coding probability 8.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01144:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HPDL-2:1
4.0 lnc-HPDL-2:1
4.1 lnc-HPDL-2:1
5.0 lnc-HPDL-2:1
5.1 LINC01144:7
5.2 LINC01144:13