Transcript: LINC01169:2

Basic information

LNCipedia transcript ID: LINC01169:2 
HGNC Gene Symbol: LINC01169    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1169
Ensembl Gene ID: ENSG00000259471
Ensembl Transcript ID: ENST00000558797
Location (hg19): chr15:66874528-66978132
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 833 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000558797.1
Alternative gene names: ENSG00000259471.1; LINC01169;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.2226 non-coding 
CPAT coding probability 5.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01169:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01169:2
4.1 LINC01169:2
5.0 LINC01169:2
5.1 LINC01169:2
5.2 LINC01169:2