Transcript: LINC01170:7

Basic information

LNCipedia transcript ID: LINC01170:7 
LNCipedia gene ID: LINC01170
Location (hg19): chr5:123964493-123965063
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081067.1|HBMT00001167636.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.5227 non-coding 
CPAT coding probability 4.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01170:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01170:7
5.0 LINC01170:7
5.1 LINC01170:7
5.2 LINC01170:7