Transcript: LINC01176:14

Basic information

LNCipedia transcript ID: LINC01176:14 
LNCipedia gene ID: LINC01176
Location (hg19): chr7:30429945-30430722
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 397 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013405; NONHSAT119867
Alternative gene names: XLOC_006035; linc-GARS-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.7707 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01176:14 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GARS-2:3
3.1 lnc-GARS-4:3
4.0 lnc-ZNRF2-4:4
4.1 lnc-ZNRF2-4:4
5.0 lnc-ZNRF2-4:4
5.1 LINC01176:5
5.2 LINC01176:14