Transcript: LINC01182:1

Basic information

LNCipedia transcript ID: LINC01182:1 
HGNC Gene Symbol: LINC01182    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1182
Ensembl Gene ID: ENSG00000250634
Ensembl Transcript ID: ENST00000510907
RefSeq ID: NR_121681
Location (hg19): chr4:13656803-13932852
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2228 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000510907; ENST00000510907.1; RP11-341G5.1-002; OTTHUMT00000360404.1; NONHSAT095582; NR_121681; ENST00000510907.5; NR_121681.1
Alternative gene names: ENSG00000250634; RP11-341G5.1; ENSG00000250634.1; OTTHUMG00000160104.2; ENSG00000250634.5; LINC01182;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.7107 non-coding 
CPAT coding probability 9.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01182:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPEB2-5:1
3.1 lnc-CPEB2-6:1
4.0 LINC01182:1
4.1 LINC01182:1
5.0 LINC01182:1
5.1 LINC01182:1
5.2 LINC01182:1