Transcript: LINC01191:4

Basic information

LNCipedia transcript ID: LINC01191:4 
LNCipedia gene ID: LINC01191
Location (hg19): chr2:114737146-114740835
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1155 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00002718; NONHSAT073859
Alternative gene names: XLOC_001634; linc-DPP10; VIN; lnc-ACTR3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.9359 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01191:4 no no no no

Available literature

  1. Winterling (2014), Evidence for a crucial role of a host non-coding RNA in influenza A virus replication., RNA Biol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACTR3-1:1
3.1 lnc-ACTR3-1:2
4.0 LINC01191:4
4.1 LINC01191:4
5.0 LINC01191:4
5.1 LINC01191:4
5.2 LINC01191:4