Transcript: LINC01194:4

Basic information

LNCipedia transcript ID: LINC01194:4 
LNCipedia gene ID: LINC01194
Location (hg19): chr5:12574969-12805295
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT100511
Alternative gene names: TAG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.4977 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01194:4 no no no no

Available literature

  1. Hogan (2004), Identification of novel and widely expressed cancer/testis gene isoforms that elicit spontaneous cytotoxic T-lymphocyte reactivity to melanoma., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIO-4:4
4.0 LINC01194:4
4.1 LINC01194:4
5.0 LINC01194:4
5.1 LINC01194:4
5.2 LINC01194:4