Transcript: LINC01201:2

Basic information

LNCipedia transcript ID: LINC01201:2 
HGNC Gene Symbol: LINC01201    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1201
Ensembl Gene ID: ENSG00000228659
Ensembl Transcript ID: ENST00000451431
Location (hg19): chrX:130115564-130173820
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 401 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00017090; ENST00000451431.1; RP1-23K20.2-002; OTTHUMT00000058283.1; NONHSAT138526
Alternative gene names: XLOC_008236; linc-ENOX2; ENSG00000228659.1; RP1-23K20.2; OTTHUMG00000022403.1; LINC01201; TCONS_00017091


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.6146 non-coding 
CPAT coding probability 11.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01201:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ENOX2-1:2
3.1 lnc-ENOX2-1:2
4.0 LINC01201:2
4.1 LINC01201:2
5.0 LINC01201:2
5.1 LINC01201:2
5.2 LINC01201:2