Transcript: LINC01202:10

Basic information

LNCipedia transcript ID: LINC01202:10 
LNCipedia gene ID: LINC01202
Location (hg19): chr5:161337570-161355664
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 565 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT104881
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -181.2212 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01202:10 no no no no

Available literature

  1. Necsulea (2014), The evolution of lncRNA repertoires and expression patterns in tetrapods., Nature


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABRB2-2:3
4.0 lnc-GABRB2-2:3
4.1 lnc-GABRB2-2:3
5.0 lnc-GABRB2-2:3
5.1 LINC01202:5
5.2 LINC01202:10