Transcript: LINC01205:3

Basic information

LNCipedia transcript ID: LINC01205:3 
HGNC Gene Symbol: LINC01205    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1205
Ensembl Gene ID: ENSG00000228980
Ensembl Transcript ID: ENST00000489670
Location (hg19): chr3:109129009-109137864
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1331 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000489670; ENST00000489670.1; RP11-702L6.4-001; OTTHUMT00000353891.1; NONHSAT091122
Alternative gene names: ENSG00000228980; RP11-702L6.4; ENSG00000228980.3; OTTHUMG00000159217.1; LINC01205;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.8677 non-coding 
CPAT coding probability 15.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01205:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRAT1-4:2
3.1 lnc-TRAT1-5:2
4.0 LINC01205:3
4.1 LINC01205:3
5.0 LINC01205:3
5.1 LINC01205:3
5.2 LINC01205:3