Transcript: LINC01215:2

Basic information

LNCipedia transcript ID: LINC01215:2 
LNCipedia gene ID: LINC01215
RefSeq ID: NR_110030
Location (hg19): chr3:107843911-107857457
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2376 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110030; NR_110030.1
Alternative gene names: ; LINC01215


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.1698 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01215:2 no no no no

Available literature

  1. Li (2015), Construction and analysis of lncRNA-lncRNA synergistic networks to reveal clinically relevant lncRNAs in cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HHLA2-1:3
4.0 LINC01215:2
4.1 LINC01215:2
5.0 LINC01215:2
5.1 LINC01215:2
5.2 LINC01215:2