Transcript: LINC01218:1

Basic information

LNCipedia transcript ID: LINC01218:1 
HGNC Gene Symbol: LINC01218    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1218
Ensembl Gene ID: ENSG00000251636
Ensembl Transcript ID: ENST00000515150
Location (hg19): chr4:101733412-101735437
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 481 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007800; ENST00000515150.1; EMCN-IT1-001; OTTHUMT00000363389.1; NONHSAT097568
Alternative gene names: XLOC_004026; linc-EMCN-1; ENSG00000251636.1; EMCN-IT1; OTTHUMG00000161011.1; LINC01218;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.4231 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01218:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPP3CA-1:1
3.1 lnc-PPP3CA-1:1
4.0 LINC01218:1
4.1 LINC01218:1
5.0 LINC01218:1
5.1 LINC01218:1
5.2 LINC01218:1