Transcript: LINC01230:9

Basic information

LNCipedia transcript ID: LINC01230:9 
LNCipedia gene ID: LINC01230
RefSeq ID: NR_110643
Location (hg19): chr9:1048143-1048641
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 499 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110643.1
Alternative gene names: LINC01230


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -437.4762 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01230:9 no no no no

Available literature

  1. Liu (2014), Tissue-specific RNA-Seq in human evoked inflammation identifies blood and adipose LincRNA signatures of cardiometabolic diseases., Arterioscler. Thromb. Vasc. Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01230:9
5.1 LINC01230:9
5.2 LINC01230:9