Transcript: LINC01249:2

Basic information

LNCipedia transcript ID: LINC01249:2 
LNCipedia gene ID: LINC01249
Location (hg19): chr2:4675757-4703812
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2721 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005063; NONHSAT068788
Alternative gene names: XLOC_001956; linc-RNASEH1-5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.1551 non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01249:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNASEH1-4:2
3.1 lnc-RNASEH1-6:2
4.0 LINC01249:2
4.1 LINC01249:2
5.0 LINC01249:2
5.1 LINC01249:2
5.2 LINC01249:2