Transcript: LINC01256:1

Basic information

LNCipedia transcript ID: LINC01256:1 
HGNC Gene Symbol: LINC01256    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1256
Ensembl Gene ID: ENSG00000251398
Ensembl Transcript ID: ENST00000513270
RefSeq ID: NR_126401
Location (hg19): chr4:133512244-133599658
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 508 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000513270.1; RP11-149A7.2-001; OTTHUMT00000366030.1; NONHSAT098335; NR_126401.1
Alternative gene names: ENSG00000251398.1; RP11-149A7.2; OTTHUMG00000161768.1; LINC01256; TCONS_l2_00021715


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.4774 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01256:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH10-1:1
4.0 LINC01256:1
4.1 LINC01256:1
5.0 LINC01256:1
5.1 LINC01256:1
5.2 LINC01256:1