Transcript: LINC01267:1

Basic information

LNCipedia transcript ID: LINC01267:1 
HGNC Gene Symbol: LINC01267    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1267
Ensembl Gene ID: ENSG00000251576
Ensembl Transcript ID: ENST00000502417
RefSeq ID: NR_110135
Location (hg19): chr3:14389951-14394068
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2284 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000502417; ENST00000502417.1; RP11-536I6.1-001; OTTHUMT00000393079.1; NONHSAT088342; NR_110135; NR_110135.1
Alternative gene names: ENSG00000251576; RP11-536I6.1; ENSG00000251576.1; OTTHUMG00000167093.1; LINC01267;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.4253 non-coding 
CPAT coding probability 8.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01267:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-XPC-3:1
3.1 lnc-XPC-3:1
4.0 LINC01267:1
4.1 LINC01267:1
5.0 LINC01267:1
5.1 LINC01267:1
5.2 LINC01267:1