Transcript: LINC01268:11

Basic information

LNCipedia transcript ID: LINC01268:11 
LNCipedia gene ID: LINC01268
Location (hg19): chr6:114191047-114194512
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 766 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227502.2|FTMT22100065258.1
Alternative gene names: LOC285758


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -148.0123 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01268:11 no no no no

Available literature

  1. Matjasic (2017), Expression of LOC285758, a Potential Long Non-coding Biomarker, is Methylation-dependent and Correlates with Glioma Malignancy Grade., Radiol Oncol
  2. Punzi (2014), Increased expression of MARCKS in post-mortem brain of violent suicide completers is related to transcription of a long, noncoding, antisense RNA., Mol. Psychiatry


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01268:11
5.0 LINC01268:11
5.1 LINC01268:11
5.2 LINC01268:11