Transcript: LINC01269:3

Basic information

LNCipedia transcript ID: LINC01269:3 
HGNC Gene Symbol: LINC01269    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1269
Ensembl Gene ID: ENSG00000258689
Ensembl Transcript ID: ENST00000553682
RefSeq ID: NR_125769
Location (hg19): chr14:71165415-71178870
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000553682.1; RP6-65G23.1-001; OTTHUMT00000412549.1; NONHSAT037575; NR_125769; NR_125769.1
Alternative gene names: ENSG00000258689.1; RP6-65G23.1; OTTHUMG00000171248.1; LINC01269;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.1074 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01269:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTC9-1:2
4.0 LINC01269:3
4.1 LINC01269:3
5.0 LINC01269:3
5.1 LINC01269:3
5.2 LINC01269:3