Transcript: LINC01276:4

Basic information

LNCipedia transcript ID: LINC01276:4 
HGNC Gene Symbol: LINC01276    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1276
Ensembl Gene ID: ENSG00000226917
Ensembl Transcript ID: ENST00000448211
Location (hg19): chr6:41486111-41487590
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 660 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000448211; ENST00000448211.1; RP11-328M4.3-001; OTTHUMT00000145709.2; NONHSAT112740
Alternative gene names: ENSG00000226917; RP11-328M4.3; ENSG00000226917.1; OTTHUMG00000067927.3; ENSG00000226917.5; LINC01276;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.1125 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01276:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXP4-1:2
3.1 lnc-FOXP4-1:2
4.0 LINC01276:4
4.1 LINC01276:4
5.0 LINC01276:4
5.1 LINC01276:4
5.2 LINC01276:4