Transcript: LINC01284:12

Basic information

LNCipedia transcript ID: LINC01284:12 
LNCipedia gene ID: LINC01284
Ensembl Gene ID: ENSG00000229151
Ensembl Transcript ID: ENST00000425150
Location (hg19): chrX:51099796-51139314
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 451 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425150.1; RP11-348F1.3-001; OTTHUMT00000056582.1; NONHSAT137050
Alternative gene names: ENSG00000229151.1; RP11-348F1.3; OTTHUMG00000021533.1; ; AC233976.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.3694 non-coding 
CPAT coding probability 8.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01284:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUDT11-2:1
4.0 lnc-NUDT11-2:1
4.1 LINC01284:12
5.0 LINC01284:12
5.1 LINC01284:12
5.2 LINC01284:12