Transcript: LINC01287:3

Basic information

LNCipedia transcript ID: LINC01287:3 
LNCipedia gene ID: LINC01287
Location (hg19): chr7:153097005-153109319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1007 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000454441; ENST00000454441.1; AC073236.3-003; OTTHUMT00000322756.1; NONHSAT124295
Alternative gene names: ENSG00000234722; AC073236.3; ENSG00000234722.2; OTTHUMG00000151464.2; TCONS_l2_00027522


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.5388 non-coding 
CPAT coding probability 23.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01287:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-XRCC2-1:3
3.1 lnc-XRCC2-1:3
4.0 LINC01287:3
4.1 LINC01287:3
5.0 LINC01287:3
5.1 LINC01287:3
5.2 LINC01287:3

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