Transcript: LINC01300:1

Basic information

LNCipedia transcript ID: LINC01300:1 
LNCipedia gene ID: LINC01300
Location (hg19): chr8:142350648-142354719
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 795 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00014470
Alternative gene names: XLOC_006947; linc-PTP4A3-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.3476 non-coding 
CPAT coding probability 22.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01300:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PTP4A3-2:1
3.1 lnc-PTP4A3-2:2
4.0 LINC01300:1
4.1 LINC01300:1
5.0 LINC01300:1
5.1 LINC01300:1
5.2 LINC01300:1