Transcript: LINC01310:2

Basic information

LNCipedia transcript ID: LINC01310:2 
LNCipedia gene ID: LINC01310
Location (hg19): chr22:49288478-49294196
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3675 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029341; NONHSAT147223
Alternative gene names: XLOC_014281; linc-ZBED4-2; WI2-81516E3.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.3701 non-coding 
CPAT coding probability 38.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01310:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM19A5-3:1
3.1 lnc-FAM19A5-3:1
4.0 LINC01310:2
4.1 LINC01310:2
5.0 LINC01310:2
5.1 LINC01310:2
5.2 LINC01310:2