Transcript: LINC01310:3

Basic information

LNCipedia transcript ID: LINC01310:3 
LNCipedia gene ID: LINC01310
Location (hg19): chr22:49288729-49294198
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3426 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000380981; ENST00000380981.2; WI2-81516E3.1-001; OTTHUMT00000317499.1
Alternative gene names: ENSG00000205632; WI2-81516E3.1; ENSG00000205632.2; OTTHUMG00000150307.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.3701 non-coding 
CPAT coding probability 39.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01310:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM19A5-3:2
3.1 lnc-FAM19A5-3:2
4.0 LINC01310:3
4.1 LINC01310:3
5.0 LINC01310:3
5.1 LINC01310:3
5.2 LINC01310:3