Transcript: LINC01324:1

Basic information

LNCipedia transcript ID: LINC01324:1 
HGNC Gene Symbol: LINC01324    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1324
Ensembl Gene ID: ENSG00000241767
Ensembl Transcript ID: ENST00000497379
Location (hg19): chr3:164431889-164549268
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 838 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005876; ENST00000497379; ENST00000497379.2; RP11-71H9.1-001; OTTHUMT00000350114.2; NONHSAT093059
Alternative gene names: XLOC_003314; linc-C3orf57-4; ENSG00000241767; RP11-71H9.1; ENSG00000241767.2; OTTHUMG00000158064.2; LINC01324;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.9454 non-coding 
CPAT coding probability 2.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01324:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SI-1:1
3.1 lnc-SI-1:1
4.0 LINC01324:1
4.1 LINC01324:1
5.0 LINC01324:1
5.1 LINC01324:1
5.2 LINC01324:1