Transcript: LINC01341:13

Basic information

LNCipedia transcript ID: LINC01341:13 
LNCipedia gene ID: LINC01341
Location (hg19): chr1:246939995-246956015
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1859 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001352; NONHSAT010732
Alternative gene names: XLOC_000643; linc-VN1R5-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 61.4175 coding 
CPAT coding probability 8.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01341:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SCCPDH-1:6
3.1 lnc-SCCPDH-1:8
4.0 LINC01341:13
4.1 LINC01341:13
5.0 LINC01341:13
5.1 LINC01341:13
5.2 LINC01341:13