Transcript: LINC01345:9

Basic information

LNCipedia transcript ID: LINC01345:9 
HGNC Gene Symbol: LINC01345    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1345
Ensembl Gene ID: ENSG00000226374
Ensembl Transcript ID: ENST00000635247
Location (hg19): chr1:4004607-4008960
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1646 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635247.1
Alternative gene names: ENSG00000226374.2; RP13-614K11.2; LINC01345


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.3124 non-coding 
CPAT coding probability 3.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01345:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C1orf174-1:4
4.1 lnc-C1orf174-1:4
5.0 lnc-C1orf174-1:4
5.1 LINC01345:5
5.2 LINC01345:9