Transcript: LINC01349:4

Basic information

LNCipedia transcript ID: LINC01349:4 
HGNC Gene Symbol: LINC01349    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1349
Ensembl Gene ID: ENSG00000230402
Ensembl Transcript ID: ENST00000416343
Location (hg19): chr1:101092605-101106169
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000416343.2
Alternative gene names: ENSG00000230402.2; RP11-84O12.4; LINC01349;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.7828 non-coding 
CPAT coding probability 19.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01349:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EXTL2-1:5
4.0 LINC01349:4
4.1 LINC01349:4
5.0 LINC01349:4
5.1 LINC01349:4
5.2 LINC01349:4