Transcript: LINC01358:4

Basic information

LNCipedia transcript ID: LINC01358:4 
LNCipedia gene ID: LINC01358
RefSeq ID: NR_110626
Location (hg19): chr1:59486148-59553919
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 471 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110626; NR_110626.2
Alternative gene names: ; LINC01358


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -228.8199 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01358:4 no no no no

Available literature

  1. Ning (2014), SNP@lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGGY-4:4
4.0 LINC01358:4
4.1 LINC01358:4
5.0 LINC01358:4
5.1 LINC01358:4
5.2 LINC01358:4