Transcript: LINC01370:2

Basic information

LNCipedia transcript ID: LINC01370:2 
LNCipedia gene ID: LINC01370
Location (hg19): chr20:38632933-38648772
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10856 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT079731
Alternative gene names: HI-LNC25


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.8814 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01370:2 no no no no

Available literature

  1. Morán (2012), Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes., Cell Metab.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX35-2:4
4.0 LINC01370:2
4.1 LINC01370:2
5.0 LINC01370:2
5.1 LINC01370:2
5.2 LINC01370:2