Transcript: LINC01376:4

Basic information

LNCipedia transcript ID: LINC01376:4 
HGNC Gene Symbol: LINC01376    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1376
Ensembl Gene ID: ENSG00000236204
Ensembl Transcript ID: ENST00000418165
Location (hg19): chr2:19226415-19505798
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 553 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418165; ENST00000418165.1; AC092594.1-004; OTTHUMT00000323837.1; NONHSAT069384; ENST00000418165.5
Alternative gene names: ENSG00000236204; AC092594.1; ENSG00000236204.1; OTTHUMG00000151766.2; ENSG00000236204.5; LINC01376;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.1085 non-coding 
CPAT coding probability 3.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01376:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OSR1-3:3
3.1 lnc-OSR1-3:3
4.0 LINC01376:4
4.1 LINC01376:4
5.0 LINC01376:4
5.1 LINC01376:4
5.2 LINC01376:4