Transcript: LINC01392:1

Basic information

LNCipedia transcript ID: LINC01392:1 
HGNC Gene Symbol: LINC01392    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1392
Ensembl Gene ID: ENSG00000233607
Ensembl Transcript ID: ENST00000419883
Location (hg19): chr7:114701591-114871409
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 565 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000419883.1; AC068610.5-001; OTTHUMT00000257953.1; NONHSAT122840
Alternative gene names: ENSG00000233607.1; AC068610.5; OTTHUMG00000133696.1; LINC01392;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -217.3942 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01392:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TFEC-6:1
4.0 LINC01392:1
4.1 LINC01392:1
5.0 LINC01392:1
5.1 LINC01392:1
5.2 LINC01392:1