Transcript: LINC01397:4

Basic information

LNCipedia transcript ID: LINC01397:4 
LNCipedia gene ID: LINC01397
Location (hg19): chr1:110626116-110627730
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 216 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00001093
Alternative gene names: XLOC_000340; linc-UBL4B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -279.8857 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01397:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UBL4B-1:3
3.1 lnc-UBL4B-1:4
4.0 LINC01397:4
4.1 LINC01397:4
5.0 LINC01397:4
5.1 LINC01397:4
5.2 LINC01397:4